I may have found an issue when I installed the Remote Desktop software via the script option and I had disabled some settings. I uninstalled it when I realized that the setting I had disabled would disallow me to connect to other Remote Desktop managed computers. When I tried to install once more, without the script/settings, I noticed I still had the previously configured settings.
TL;DR:
I noticed that when I uninstalled the application, the configuration is not also removed from %ProgramData%/Remote Desktop.
If this is by design, please ignore.